Posts

• May 16, 2025

  EMSI 2025 Phylodynamics Tutorial

• May 22, 2024

  EMSI 2024 Phylodynamics Tutorial

• Apr 8, 2024

  Tracking SARS-CoV-2 imports using massive genomic datasets

• Apr 1, 2024

  Fitting SIR models to phylogenies using PhyDyn

• Mar 27, 2024

  Simulating epidemics and trees with MASTER

• Mar 18, 2024

  SIR epidemiological models

• Mar 4, 2024

  Estimating the fitness of antimicrobial resistance mutations

• Feb 19, 2024

  Detecting recombination in RDP4

• Feb 11, 2024

  Transmission tree reconstruction with SCOTTI

• Feb 5, 2024

  Coalescent Skylines in BEAST

• Jan 29, 2024

  Discrete trait phylogeography

• Jan 22, 2024

  MCMC in BEAST 2

• Jan 15, 2024

  Bioinformatic pipelines for genomic sequencing data

• Jan 8, 2024

  Wrangling sequences and trees

• Jan 8, 2022

  Syllabus now available for Spring 2022

• Feb 4, 2020

  Structured coalescent inference with MASCOT

• Sep 17, 2019

  Syllabus now available for Spring 2020

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